Study cohort characteristics Gating strategy to define major memory CD4+ T cell and MBC populations Identification of MBC and memory CD4+ T-cell sub-populations induced by P. falciparum symptomatic and asymptomatic infection High-dimensional mass cytometry identifies subsets of MBCs and T cells associated with reduced risk of symptomatic P. falciparum malaria Transcriptomic cohort characteristics RNA sequencing of PBMCs segregates transcriptional profiles of symptomatic and asymptomatic P. falciparum malaria and healthy immune controls Symptomatic P. falciparum malaria infection drives transcriptional profiles supporting inflammatory processes and fatty acid metabolism Asymptomatic P. falciparum malaria upregulates transcription of pathways involved in immunosuppressive processes Asymptomatic P. falciparum malaria upregulates transcription of pathways involved in immunosuppressive processes Correlations between cell populations identified by CyTOF and P. falciparum malaria blood transcriptional signatures Asymptomatic P. falciparum malaria supports humoral responses to infection, but drives immunosuppressive responses Correlations between cell populations identified by CyTOF in response to P. falciparum infection CTLA-4 is upregulated in memory CD4+ T cells in asymptomatic malaria and contributes to the development of clinically silent parasitemia Molecular profiling reveals features of clinical immunity and immunosuppression in asymptomatic P. falciparum malaria

Asymptomatic Plasmodium falciparum malaria infection supports protective humoral responses, but it also features an immunosuppressive transcriptional signature with upregulation of pathways involved in the inhibition of T-cell function.

Abstract

Clinical immunity to P. falciparum malaria is non-sterilizing, with adults often experiencing asymptomatic infection. Historically, asymptomatic malaria has been viewed as beneficial and required to help maintain clinical immunity. Emerging views suggest that these infections are detrimental and constitute a parasite reservoir that perpetuates transmission. To define the impact of asymptomatic malaria, we pursued a systems approach integrating antibody responses, mass cytometry, and transcriptional profiling of individuals experiencing symptomatic and asymptomatic P. falciparum infection. Defined populations of classical and atypical memory B cells and a TH2 cell bias were associated with reduced risk of clinical malaria. Despite these protective responses, asymptomatic malaria featured an immunosuppressive transcriptional signature with upregulation of pathways involved in the inhibition of T-cell function, and CTLA-4 as a predicted regulator in these processes. As proof of concept, we demonstrated a role for CTLA-4 in the development of asymptomatic parasitemia in infection models. The results suggest that asymptomatic malaria is not innocuous and might not support the induction of immune processes to fully control parasitemia or efficiently respond to malaria vaccines.

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